AI is not just helping make drugs – it’s now making them on its own. New tech has made drug making faster and better, cutting down time from ten years to just a few. For instance:
- Insilico Medicine: Made ISM001-055, an AI-made fibrosis drug now in Phase II tests.
- DeepMind‘s AlphaFold 3: Moved from guessing protein shapes to making new drugs, helping vaccine work.
- DeepCure: Built a setup with huge lists of drug picks for things like cancer.
AI tools look at big data, make molecules, and know results quicker than old ways. But, there are risks like safety, unclear choices, and who owns what. Groups like the FDA and EU need clear AI steps to keep things safe and answerable.
AI is changing health care, making new finds quicker and cheaper. Yet, as it grows, rules and ethics must catch up to make sure the gains help all.
A quest for a cure: AI drug design with Isomorphic Labs

How AI Grew from Helper to Maker
In the last few years, tech leaps have pushed AI from just a tool for study to a key player in making new finds. This change – from guessing results to making answers – shows the point where AI began truly making drugs.
From Guessing Shapes to Making Molecules
AI’s trip began with tools like AlphaFold, first made to guess the 3D shapes of proteins. Now, it’s moved to shaping how proteins work with drug parts [1][3]. This jump has set the base for AI to not just guess but to truly make new mixes.
Learning and making models have pushed this even more. By looking at known molecule shapes, these AI systems can make new mixtures [2][4]. Acting like an AI chemist, these tools can think up and check millions of parts in much less time than humans.
Firms like Insilico Medicine, DeepCure, and Atomwise are on top. Atomwise‘s AtomNet has looked at three trillion parts that can be made, taking many AI-made choices into tests [4].
Making Drug Searches Faster
The old way to find drugs often tries out thousands of parts over long years. AI, instead, can look at millions of options in hours [2]. This is not only fast – it’s a new way to look at study.
By making steps like picking targets, making parts, and early tests quick, AI has cut down how long it takes to find drugs. What used to take ten years may now just take 3-6 years [2]. To see it clearly, usual ways might try and test 2,500 to 5,000 parts in five years. In that same time, AI ways can make and tweak 136 parts for set targets in just a year [2].
AI has begun to run its tests through active learning [2]. By doing this, it has moved from a help tool to leading the study work. The results are clear: AI-made drugs do well in 80-90% of first tests, unlike 40-65% with old ways [2]. With faster times, these steps could also cut costs by up to 70%.
AI in Drug Making
AI is changing drug making. We see it in strong, real ways as it changes how new meds are found and made. Let’s look at some clear cases that show its use.
Insilico Medicine‘s ISM001-055

Insilico Medicine made use of its AI tools to find ISM001-055, a drug for fibrosis. The cool part here is how the AI found a key protein and made a match for it – something that usually takes much longer. This drug made by AI has moved to Phase II trials, making drug making quicker and better.
AlphaFold 3 and Vaccine Work
DeepMind’s AlphaFold 3 has pushed its work on how proteins are made further by helping with vaccine work. For instance, in malaria work, AlphaFold 3 guessed how proteins would work together, helping find vaccine options much quicker than old ways. By using digital tools to look at protein make-up, it speeds up finding targets and making vaccine work flow better.
DeepCure‘s Molecule Library Platform

DeepCure uses AI to make big sets of drug parts, letting US biotech groups have more ways to treat health issues. This tool looks at what makes drugs work and makes new types, opening ways to treat hard issues like cancer and brain illnesses. These big libraries are changing the game, making new ways to fight hard diseases.
These cases show how AI is a main part in drug making today, changing how it’s done and expanding what we can do.
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How AI Changes Making New Drugs
AI is changing how we make drugs, making it faster and maybe cheaper. What used to take a long time and a lot of money is now quicker, thanks to new AI tech.
Lower Costs and Quicker Making
AI does more than just help the experts – it now plays a big part in changing how we make drugs. By making key steps like finding targets and making compounds faster, AI has changed how new drugs are made.
Look at AlphaFold 3, for one. This tool has changed how experts find drug targets, making it much faster. Also, firms like Insilico Medicine use AI to make compounds better. These new steps are making drug research faster and cheaper.
Who Owns AI-Made Molecules?
While AI helps make new things, it also brings up big questions about who owns the ideas. In the U.S., the laws say a real person has to be named on forms. This is hard when a computer makes something new by itself. To deal with this, firms use both people and AI to fit the rules.
But, this is not the end. Other places have different rules, which could change how firms put money into making new drugs. As AI keeps moving forward in finding new drugs, it also changes what it means to own and make new things in the drug world.
Dangers and Rules in Response
AI has for sure made finding new drugs faster, but it also brings risks that could hurt how safe patients are and how much trust people have in drugs made by AI.
Dangers of AI in Finding Drugs
One big worry with AI in this work is making "false molecules." These are mixes that seem good in computer tests but do not work in real life. Another issue is the gap in explaining – not being able to fully get how AI makes its choices. When AI picks out a new drug or makes a mix, it’s often hard for scientists to follow its thought steps, making it harder to spot problems before testing on people. For example, AI might miss bad side effects because it was not trained with enough safety info.
Another big problem is effects not wanted. AI might make drugs that do their main job well but also cause bad side effects in the body. While old ways of finding drugs use experts to spot these risks early, AI does not get the complex parts of how bodies work like human experts do.
The quick speed at which AI finds many possible mixes also brings issues. With so many options, the rush to move forward with hopeful mixes can sometimes go faster than the chance to check them safely.
These dangers have made rule-makers bring in tighter checks to keep patients safe and keep trust in AI-driven drug making.
New Rules
In 2024, the FDA made new advice for using AI and learning machines in finding drugs. This advice asks firms to write down the data used to train their AI, tell how their models make choices, and make sure people check on key decisions. Also, firms must show that their AI works well on many drug types.
The EU AI Act, which started in 2024 too, uses a careful way like this. It names AI in drug finding as "high-risk" uses, asking for strict clearness needs. Firms must keep careful records of how their AI works and give clear info when asking for drug approval.
Both the FDA and the European Medicines Agency now ask for full AI origin info. This includes which drug finding steps used AI, the data for training the models, and how people were a part of the work steps.
While some experts think these rules could make using AI in drug finding slower, rule-makers say that having strong checks now will stop bigger problems later. The aim is to find a middle way: using AI’s power to find new drugs while making sure those drugs are safe for people.
To meet these new rules, companies are hiring rule experts and putting money in "explainable AI" systems. These systems work to make the AI’s choice-making more clear, helping both rule-makers and scientists better get how conclusions are reached.
What Is Next for AI in Science
As AI keeps changing drug making, we see more ways it can help in big studies. More than just making things, AI now helps in thinking up ideas and setting up tests. It gets better at working with hard data sets fast, pushing what computers can do in finding new things. But these big steps bring up big asks, mostly about who gets credit. If AI is key in a find, who should we thank – the people who made it or can the AI get a big award like the Nobel Prize?
Some think as AI grows, we may need to change how we say who did what and look again at the rules of who owns ideas. Others say we still must have people in charge, so the thanks will always go to the humans who use these tools. What we know is that AI is more than just a tool now – it’s a real partner in study. This new team-up of human thoughts and computer smarts is changing how we make new things, making us think hard about what comes next in finding out new stuff.
FAQs
How do places like the FDA and EU make sure AI is safe in making drugs?
Groups like the FDA and the EU are making rules to handle the risks of using AI in making drugs, making sure it’s safe and people can be held to account. The FDA’s planned rules for 2025 stress a careful look at risks when checking AI models, focusing on their safety, good work, and trustworthiness. The EU’s AI Act also calls for clearness, being able to track things, and easy-to-understand info for high-risk AI setups, which include those in drug-making.
Their work aims to mix AI into finding and okaying drugs in a safe way, keeping a good mix of new tech and patient safety.